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Sequence alignment
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101	Appendix Sequence Data and Alignment We have used Drosophila melanogaster sequence fragments with accession numbers AJ568984AJ571588 [1], from [2] and AM000058-AM003900 [3]. These fragments are scattered across the X chr Add to Reading List Source URL: www.thp.uni-koeln.de Language: English - Date: 2010-07-27 11:48:47
102	BIOINFORMATICS ORIGINAL PAPER Vol. 22 no, pages 1577–1584 doi:bioinformatics/btl147 Add to Reading List Source URL: www-stat.wharton.upenn.edu Language: English - Date: 2006-07-24 16:35:54 Bioinformatics Biology Biotechnology Sequence motif DNA binding site Phylogenetic footprinting Sequence logo ST motif Meme Sequence alignment Consensus sequence Multiple EM for Motif Elicitation
103	Statistical Science 2004, Vol. 19, No. 1, 188–204 DOI088342304000000107 © Institute of Mathematical Statistics, 2004 Computational Discovery of Gene Add to Reading List Source URL: www-stat.wharton.upenn.edu Language: English - Date: 2006-07-24 16:11:35 Bioinformatics Biology Multiple sequence alignment Position weight matrix DNA binding site Consensus sequence ST motif Nucleic acid sequence Sequence alignment Promoter Expectationmaximization algorithm Sequence motif
104	Homework Assignment 3 http://biochem218.stanford.edu/03Homework.pdf 1. 2. Add to Reading List Source URL: biochem218.stanford.edu Language: English - Date: 2014-04-24 01:19:16 Bioinformatics Biological databases Computational phylogenetics Proteins InterPro PROSITE BLAST Protein family Sequence alignment Protein superfamily FASTA Gene ontology
105	A Sequence-based Tree Similarity Search Alsayed Algergawy and Friederike Klan Heinz Nixdorf Chair for Distributed Information Systems Friedrich Schiller University of Jena, Germany Add to Reading List Source URL: rcis2015.hua.gr Language: English - Date: 2015-05-18 11:58:39 Binary trees Knowledge representation Tree R-tree Node B-tree Tree alignment
106	Application of VAMSAS enabled tools for the investigation of protein evolution Add to Reading List Source URL: www.open-bio.org Language: English - Date: 2016-02-19 00:12:13 Computational phylogenetics Bioinformatics Biology Jalview Sequence alignment Multiple sequence alignment Nucleic acid sequence Influenza Research Database Virus Pathogen Database and Analysis Resource
107	Multiple Sequence Alignment with a Tree-Based Weighting System O. Gotoh Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:03 Computational phylogenetics Bioinformatics Multiple sequence alignment Sequence alignment Alignment
108	183 EVALUATION OF SEQUENCE ALIGNMENTS OF DISTANTLY RELATED SEQUENCE PAIRS WITH RESPECT TO STRUCTURAL SIMILARITY AYSAM GÜRLER Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2007-09-27 22:33:12 Bioinformatics Biology Computational phylogenetics Protein methods Protein structure Matrices Sequence alignment Structural alignment BLAST FASTA Substitution matrix Sequence analysis
109	Rapid identity searching program for DNA sequences and its applications to cDNA grouping T. Nishikawa S. Hiraoka Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:05 Computational phylogenetics Bioinformatics FASTA BLAST Nucleic acid sequence Sequence Sequence alignment National Center for Biotechnology Information
110	SeqMan NGen 12.2 vs. Geneious 8.1: Variant Detection Comparison Using Data from NA12878 To obtain reliable variant results, the accuracy of sequence alignment, consensus calling and variant detection is of paramount impo Add to Reading List Source URL: www.dnastar.com Language: English - Date: 2015-09-02 15:19:53

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